Beyond race: towards a whole-genome perspective on human populations and genetic variation

Posted in Articles, Health/Medicine/Genetics, Media Archive on 2013-09-13 03:10Z by Steven

Beyond race: towards a whole-genome perspective on human populations and genetic variation

Nature Reviews Genetics
Volume 5, Issue 10 (October 2004)
pages 790-796
DOI: 10.1038/nrg1452

Morris W. Foster, Professor of Anthropology
University of Oklahoma

Richard R. Sharp, Director of Bioethics Research
Cleveland Clinic, Cleveland, Ohio

The renewed emphasis on population-specific genetic variation, exemplified most prominently by the International HapMap Project, is complicated by a longstanding, uncritical reliance on existing population categories in genetic research. Race and other pre-existing population definitions (ethnicity, religion, language, nationality, culture and so on) tend to be contentious concepts that have polarized discussions about the ethics and science of research into population-specific human genetic variation. By contrast, a broader consideration of the multiple historical sources of genetic variation provides a whole-genome perspective on the ways in which existing population definitions do, and do not, account for how genetic variation is distributed among individuals. Although genetics will continue to rely on analytical tools that make use of particular population histories, it is important to interpret findings in a broader genomic context.

Read the entire article here.

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Skin pigmentation, biogeographical ancestry and admixture mapping

Posted in Anthropology, Articles, Health/Medicine/Genetics, Media Archive, United Kingdom, United States on 2013-09-13 01:01Z by Steven

Skin pigmentation, biogeographical ancestry and admixture mapping

Human Genetics
Volume 112, Issue 4 (April 2003)
pages 387-399

Mark D. Shriver, Professor of Anthropology
Pennsylvania State University

Esteban J. Parra
Department of Anthropology
University of Toronto at Mississauga

Sonia Dios
Department of Anthropology
Pennsylvania State University

Carolina Bonilla
Department of Anthropology
Pennsylvania State University

Heather Norton
Department of Anthropology
Pennsylvania State University

Celina Jovel
Department of Anthropology
Pennsylvania State University

Carrie Pfaff
Department of Anthropology
Pennsylvania State University

Cecily Jones
National Human Genome Center
Howard University, Washington, D.C.

Aisha Massac
National Human Genome Center
Howard University, Washington, D.C.

Neil Cameron
Takeway Media, London

Archie Baron
Takeway Media, London

Tabitha Jackson
Takeway Media, London

George Argyropoulos
Pennington Center for Biomedical Research, Baton Rouge, Louisiana

Li Jin
Department of Environmental Health
University of Cincinnati, Cincinnati, Ohio

Clive J. Hoggart
Department of Epidemiology and Population Health
London School of Hygiene and Tropical Medicine

Paul M. McKeigue
Department of Epidemiology and Population Health
London School of Hygiene and Tropical Medicine

Rick A. Kittles
National Human Genome Center
Howard University, Washington, D.C.

Ancestry informative markers (AIMs) are genetic loci showing alleles with large frequency differences between populations. AIMs can be used to estimate biogeographical ancestry at the level of the population, subgroup (e.g. cases and controls) and individual. Ancestry estimates at both the subgroup and individual level can be directly instructive regarding the genetics of the phenotypes that differ qualitatively or in frequency between populations. These estimates can provide a compelling foundation for the use of admixture mapping (AM) methods to identify the genes underlying these traits. We present details of a panel of 34 AIMs and demonstrate how such studies can proceed, by using skin pigmentation as a model phenotype. We have genotyped these markers in two population samples with primarily African ancestry, viz. African Americans from Washington D.C. and an African Caribbean sample from Britain, and in a sample of European Americans from Pennsylvania. In the two African population samples, we observed significant correlations between estimates of individual ancestry and skin pigmentation as measured by reflectometry (R2=0.21, P<0.0001 for the African-American sample and R2=0.16, P<0.0001 for the British African-Caribbean sample). These correlations confirm the validity of the ancestry estimates and also indicate the high level of population structure related to admixture, a level that characterizes these populations and that is detectable by using other tests to identify genetic structure. We have also applied two methods of admixture mapping to test for the effects of three candidate genes (TYR, OCA2, MC1R) on pigmentation. We show that TYR and OCA2 have measurable effects on skin pigmentation differences between the west African and west European parental populations. This work indicates that it is possible to estimate the individual ancestry of a person based on DNA analysis with a reasonable number of well-defined genetic markers. The implications and applications of ancestry estimates in biomedical research are discussed.

Read the entire article here.

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Comorbid substance use disorders with other Axis I and II mental disorders among treatment-seeking Asian Americans, Native Hawaiians/Pacific Islanders, and mixed-race people

Posted in Articles, Health/Medicine/Genetics, Media Archive, United States on 2013-09-11 14:53Z by Steven

Comorbid substance use disorders with other Axis I and II mental disorders among treatment-seeking Asian Americans, Native Hawaiians/Pacific Islanders, and mixed-race people

Journal of Psychiatric Research
Available online 2013-09-09
DOI: 10.1016/j.jpsychires.2013.08.022

Li-Tzy Wu, ScD, RN, MA, Professor of Psychiatry and Behavioral Sciences
Department of Psychiatry and Behavioral Sciences, School of Medicine
Duke University Medical Center, Durham, North Carolina

Dan G. Blazer, MD, PhD, Professor of Psychiatry and Behavioral Sciences; Professor of Community and Family Medicine
Department of Psychiatry and Behavioral Sciences, School of Medicine
Duke University Medical Center, Durham, North Carolina

Kenneth R. Gersing, MD, Clinical Associate
Department of Psychiatry and Behavioral Sciences, School of Medicine
Duke University Medical Center, Durham, North Carolina

Bruce Burchett, PhD, Assistant Professor in Psychiatry and Behavioral Sciences
Department of Psychiatry and Behavioral Sciences, School of Medicine
Duke University Medical Center, Durham, North Carolina

Marvin S. Swartz, MD, Professor in Psychiatry and Behavioral Sciences
Department of Psychiatry and Behavioral Sciences, School of Medicine
Duke University Medical Center, Durham, North Carolina

Paolo Mannelli, MD, Associate Professor of Psychiatry and Behavioral Sciences
Department of Psychiatry and Behavioral Sciences, School of Medicine
Duke University Medical Center, Durham, North Carolina

Little is known about behavioral healthcare needs of Asian Americans (AAs), Native Hawaiians/Pacific Islanders (NHs/PIs), and mixed-race people (MRs)—the fastest growing segments of the U.S. population. We examined substance use disorder (SUD) prevalences and comorbidities among AAs, NHs/PIs, and MRs (N=4572) in a behavioral health electronic health record database. DSM-IV diagnoses among patients aged 1–90 years who accessed behavioral healthcare from 11 sites were systematically captured: SUD, anxiety, mood, personality, adjustment, childhood-onset, cognitive/dementia, dissociative, eating, factitious, impulse-control, psychotic/schizophrenic, sleep, and somatoform diagnoses. Of all patients, 15.0% had a SUD. Mood (60%), anxiety (31.2%), adjustment (30.9%), and disruptive (attention deficit-hyperactivity, conduct, oppositional defiant, disruptive behavior diagnosis, 22.7%) diagnoses were more common than others (psychotic 14.2%, personality 13.3%, other childhood-onset 11.4%, impulse-control 6.6%, cognitive 2.8%, eating 2.2%, somatoform 2.1%). Less than 1% of children aged <12 years had SUD. Cannabis diagnosis was the primary SUD affecting adolescents aged 12–17. MRs aged 35–49 years had the highest prevalence of cocaine diagnosis. Controlling for age at first visit, sex, treatment setting, length of treatment, and number of comorbid diagnoses, NHs/PIs and MRs were about two times more likely than AAs to have ≥2 SUDs. Regardless of race/ethnicity, personality diagnosis was comorbid with SUD. NHs/PIs with a mood diagnosis had elevated odds of having SUD. Findings present the most comprehensive patterns of mental diagnoses available for treatment-seeking AAs, NHs/PIs, and MRs in the real-world medical setting. In-depth research is needed to elucidate intraracial and interracial differences in treatment needs.

Read or purchase the article here.

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Are There Human Races? The Evolutionary Biology—Or Not—Of Race

Posted in Anthropology, Articles, Health/Medicine/Genetics, Media Archive, Social Science on 2013-09-07 18:03Z by Steven

Are There Human Races? The Evolutionary Biology—Or Not—Of Race

The Subversive Archaeologist
2013-05-19

Robert H. Gargett, Research Scholar of Archaeology / Human Origins
Ronin Institute

Foreword: I ran a series on “race” and racism that began on October 7, 2011, which was the SA’s third day in cyberspace. I’ll be putting it up again in its several parts, beginning today [revised and expanded, as the publishers say]. If you’ve seen it before, please forgive my publishing “re-runs.” Fighting bigotry should be our full-time job, and bigotry is nowhere as insidious as it is in the concept of “race.” So, it won’t hurt to air these thoughts again, in the hope of reaching a different audience this time around.

From the Age of Exploration—beginning at the end of the Middle Ages—Europeans and their descendants legitimated their imperialist expansion ideologically by seeing non-European people through the lens of a racial worldview. Wherever Europeans colonized, and for differing lengths of time, you saw the usurpation of power and territory at the expense of indigenous people who were inevitably deemed to be a different race. In many cases the oppressed were seen as not just non-European, but non-human. Today, wherever Europeans are still in power, indigenous people suffer existence at the margins of society, bereft of any real power, and often bereft of any connection with their past other than through the memories of degradation they experienced during and after the European invasion.

Where indigenous people have retaken control of former colonies, they live with the heritage of divisive and authoritarian colonialism: inefficient and inadequate infrastructure, and the legacy of old hatreds generated by colonial governments that pitted one group against another. In some cases those same Europeans enslaved the indigenous people, and the descendants of those slaves exist as a permanent underclass in the United States, Brazil, and elsewhere. And let’s not forget that this might never have taken place without the complicity, and greed, of powerful, indigenous African groups.

Race matters, today, because we all live with its twin—racism (itself the bastard offspring of a more broad-ranging bigotry). Anthropology (and through it, archaeology) has much to contribute to the race debate in the present, even if it has a somewhat uneven record, historically, on the matter of race. As much as anthropologists have made substantial additions to knowledge of the human species, they have also—implicitly and explicitly—added much fuel to the social conflagration that is racism.

It’s long since time to make amends…

Read the entire article here.

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Race and Justice in Transnational Perspective: “The Return of Pseudoscientific Racism? DNA Ancestry Testing, Race, and the New Eugenics Movement”

Posted in Health/Medicine/Genetics, Live Events, Media Archive, Politics/Public Policy, United States on 2013-09-05 03:22Z by Steven

Race and Justice in Transnational Perspective: “The Return of Pseudoscientific Racism? DNA Ancestry Testing, Race, and the New Eugenics Movement”

Seminar Series: Race and Justice in Transnational Perspective
University of California, Merced
California Room
5200 North Lake Rd.
Merced, California 95343
2013-10-17, 10:30 PDT (Local Time)

Paul Spickard, Professor of History
University of California, Santa Barbara

Ancestry.com wants you to swab your cheek and send them a DNA sample and a check.  In return, they promise to tell you who your remote ancestors were.  Eminent literary scholar Henry Louis Gates, Jr., performs the same miracle on national TV.  Modern genetic technology, they promise, can tell you intimate details about your family’s past.  Professor Spickard’s lecture examines the claims of the DNA ancestry testing industry, compares them to the assumptions and claims of the racialist pseudoscience of the late 19th and early 20th century, evaluates their validity, and suggests what may really be going on with this ancestry testing business.

Paul Spickard is Professor of History and Affiliate Professor of Black Studies, Asian American Studies, East Asian Studies, Religious Studies, and the Center for Middle Eastern Studies at the University of California, Santa Barbara.  He is author or editor of eighteen books and seventy-odd articles on race, migration, and related topics in the United States, the Pacific, Northeast Asia, and Europe, including:

The seminar series “Race and Justice in Transnational Perspective” is organized by Tanya Golash-Boza, Nigel Hatton, and David Torres-Rouff. The event is co-sponsored by the UC Center for New Racial Studies, Sociology, and SSHA.

For more information, click here.

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Mapping “Race”: Critical Approaches to Health Disparities Research

Posted in Anthologies, Books, Health/Medicine/Genetics, Media Archive, Social Science, United States on 2013-09-01 02:10Z by Steven

Mapping “Race”: Critical Approaches to Health Disparities Research

Rutgers University Press
2013-08-12
256 pages
6 figures, 8 tables, 6 x 9
Paper ISBN: 978-0-8135-6136-3
Cloth ISBN: 978-0-8135-6137-0
Ebook ISBN: 978-0-8135-6138-7

Edited by:

Laura E. Gómez, Professor of Law, Sociology, and Chicano Studies
University of California, Los Angeles

Nancy López, Associate Professor of Sociology
University of New Mexico

Forward by:

R. Burciaga Valdez

Researchers commonly ask subjects to self-identify their race from a menu of preestablished options. Yet if race is a multidimensional, multilevel social construction, this has profound methodological implications for the sciences and social sciences. Race must inform how we design large-scale data collection and how scientists utilize race in the context of specific research questions. This landmark collection argues for the recognition of those implications for research and suggests ways in which they may be integrated into future scientific endeavors. It concludes on a prescriptive note, providing an arsenal of multidisciplinary, conceptual, and methodological tools for studying race specifically within the context of health inequalities.

Table of Contents

  • List of Figures and Tables
  • Foreword by R. Burciaga Valdez
  • Preface
  • 1. Introduction: Taking the Social Construction of Race Seriously in Health Disparities Research / Laura E. Gómez
  • Part I: Charting the Problem
    • 2. The Politics of Framing Health Disparities: Markets and Justice / Jonathan Kahn
    • 3. Looking at the World through “Race”-Colored Glasses: The Fallacy of Ascertainment Bias in Biomedical Research and Practice / Joseph L. Graves Jr.
    • 4. Ethical Dilemmas in Statistical Practice: The Probelm of Race in Biomedicine / Jay S. Kaufman
    • 5. A Holistic Alternative to Current Survey Research Approaches to Race / John A . Garcia
  • Part II: Navigating Diverse Empirical Settings
    • 6. Organizational Practice and Social Constraints: Problems of Racial Identity Data Collection in Cancer Care and Research / Simon J. Craddock Lee
    • 7. Lessons from Political Science: Health Status and Improving How We Study Race / Gabriel R. Sanchez and Vickie D. Ybarra
    • 8. Advancing Asian American Mental Health Research by Enhancing Racial Identity Measures / Derek Kenji Iwamoto, Mai M. Kindaichi, and Matthew Miller
  • Part III. Surveying Solutions
    • 9. Representing the Multidimensionality of Race in Survey Research / Allya Saperstein
    • 10. How Racial-Group Comparisons Create Misinformation in Depression Research: Using Racial Identity Theory to Conceptualize Health Disparities / Janet E. Helms and Ethan H. Mereish
    • 11. Jedi Public Health: Leveraging Contingencies of Social Identity to Grasp and Eliminiate Racial Health Inequality / Arline T. Geronimus
    • 12. Contextualizing Lived Race-Gender and the Racialized-Gendered Social Determinants of Health / Nancy López
  • Notes on Contributors
  • Index
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There Is No Scientific Rationale for Race-Based Research

Posted in Articles, Health/Medicine/Genetics, Media Archive, Politics/Public Policy, United States on 2013-08-19 20:37Z by Steven

There Is No Scientific Rationale for Race-Based Research

Journal of the National Medical Association
Volume 99, Number 6 (June 2007)
pages 690-692

Eddie L. Hoover, Professor of Surgery
State University of New York, Buffalo

For centuries, the colonial governments used a combination of race and ethnic characteristics to subjugate and control people of color, and scientists of the day provided evidence of the “natural order of things” to support national policies of domination, segregation and control. There have been many examples of events in the past 70 years to suggest that achievements by ethnic peoples are not genetically determined and that race and ethnicity are merely terms to describe external features, language, culture, social mores and folklore. BiDil was the first drug in this country approved by the FDA for use in a single “race” after a clinical trial that enrolled only members of that race. Thus arose the question of the efficacy of doing race-based research in humans. In order for this kind of research to have any scientific basis, each individually defined or self-declared race would have to have a 100% pure gene pool, and the data show that the gene pool among whites, blacks and Hispanics in America is very heterogeneous. This makes for far greater similarities among U.S. citizens than any perceived differences, and genomic science has failed to support the concept of racial categories in medicine.Scientists involved with the first mapping of the human genome have noted that there is no basis in the genetic code for race. That being the case, there appears to be no justification for race-based research among human beings.

Although the United States has experienced enormous improvements in its healthcare system over the past half-century, there are still widening disparities in most disease processes between whites and blacks/Hispanics.’ There has been much debate as to how these disparities can be eliminated, but simple, logical programs that could be tailored to specific minority communities in different geographical locations have not proven to be practical for a variety of reasons. To be sure, disparities in healthcare, like anything else, are a function of a variety of factors, including education, environment, income and culture, among others. Race and ethnicity are important determinants of some of these functions, thus raising the question as to whether these parameters may, in fact, be determinants of outcome in some of these disease processes based upon genetics as well as the aforementioned risk factors.

Modern-day science has amassed enough evidence to suggest that there is very little biological difference between the various races. In order for race-based research to have any scientific basis, each individually defined or self-declared race would have to have a 100% pure and homogeneous gene pool. Some racial and ethnic groups have a very heterogeneous gene pool, such as whites and Hispanics. The same scientific data show that approximately 80% of American blacks have some degree of white ancestry, and although not so nearly well publicized is the fact that many whites also have black and Hispanic ancestry. This would make for far greater similarities in the U.S. black/white gene pool than any perceived differences, and genomic science has failed to support the concept of racial categories in medicine and further purports that there is more genetic diversity within a “racial cohort” than any differences between two such cohorts.” Craig Venter, who helped produce the first map of the human genome, noted that there is no basis in the genetic code for race.’ That being the case, race then becomes rather meaningless in scientific research. This would obviously include race-based pharmaceutical research that resulted in the drug BiDil. This is not to be confused with the fact that race indeed affects both access and outcomes in our healthcare system, as it most certainly does. Even black medical professionals do not enjoy the same access to highly specialized services as their white counterparts, such as coronary artery bypass grafting, but the basis is not biological and by extension, not genetically determined…

Read the entire article here.

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Black and White Medicine

Posted in Book/Video Reviews, Health/Medicine/Genetics, Media Archive, United States on 2013-08-09 03:07Z by Steven

Black and White Medicine

PsycCRITIQUES
Volume 58, Number 32 (August 2013)
5 pages

Alejandra Suarez, Professor of Psychology
Antioch University, Seattle

A review of Race in a Bottle: The Story of BiDil and Racialized Medicine in a Post-Genomic Age by Jonathan Kahn New York, NY: Columbia University Press, 2013. 311 pp. ISBN 978-0-231-16298-2 (hardcover); ISBN 978-0-231-53127-6 (e-book), hardcover.

What is your race? (a) Mestizo, (b) Greek, (c) Creole, (d) Peninsular, (e) Mulatto, (f) Quadroon, (g) Octoroon, (h) Indian, (i) Chinese, (j) Japanese, (k) Moor, (l) Syrian, or (m) Nubian? In another time and place, these may have been the available choices. Obviously these categories are not anthropologically or scientifically based.

Currently the United States uses the definition of racial categories as published by the Office of Management and Budget (1997) in its Revised Directive 15. Directive 15 stems from the civil rights movement; it aims to provide consistent data and a uniform language in order to increase fairness in society. All federally funded research with human participants is required to address issues of race, although the OMB explicitly states that its categories are not anthropologically or scientifically based.

The current racial choices in the United States are (a) American Indian or Alaska Native, (b) Asian, (c) Black or African American, (d) Native Hawaiian or other PacificIslander, and (e) White. There are two categories for data on ethnicity: (a) Hispanic or Latino and (b) not Hispanic or Latino (Office of Management and Budget, 1997). Many people objected that it is difficult to fit into these categories, so in the 2000 census, one could also self-select multiple categories of race/ethnicity. Selecting one’s race is complicated: It is about identities; it is not about genetic differences.

The human genome project, completed in June 2000, concluded that all human beings, regardless of race, have pretty much the same genes. In fact, the American Anthropological Association has asserted that race is “a worldview, a body of prejudgments that distorts our ideas about human differences and group behavior” and that “racial beliefs constitute myths about the diversity in the human species and about the abilities and behavior of people homogenized into ‘racial’ categories” (American Anthropological Association, 1998, para. 8, and cited in book under review, p. 40).

Race is an ideology that changes according to time and place. However, at the same time that the human genome project has unequivocally demonstrated that race is a construct with no biological validity, the idea of race as a genetically based population variant is becoming more and more entrenched in biomedical research and practice. How is it possible?…

Read the entire review here.

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Disparity in Breast Cancer Between Black and White Women Can Be Eliminated by Regular Mammography Screening

Posted in Articles, Health/Medicine/Genetics, Media Archive, United States, Women on 2013-08-06 01:49Z by Steven

Disparity in Breast Cancer Between Black and White Women Can Be Eliminated by Regular Mammography Screening

Rush University Medical Center
News Release
2012-09-25

(CHICAGO) — Regular mammography screening can help narrow the breast cancer gap between black and white women, according to a retrospective study published in Breast Cancer Research and Treatment in August.

Earlier studies have shown that black women in Chicago are more than twice as likely to die of breast cancer compared to white women. Black women with breast cancer reach the disease’s late stages more often than white women, and their tumors are more likely to be larger and more biologically aggressive.

But according to the study, when women of both races received regular breast cancer screening — a mammogram within two years of breast cancer diagnosis — there was no difference in the rate of how many of them presented in the disease’s later stages

Read the entire news release here.

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Our Zip Code May Be More Important Than Our Genetic Code: Social Determinants of Health, Law and Policy

Posted in Articles, Health/Medicine/Genetics, Law, Media Archive, Politics/Public Policy, United States on 2013-08-05 05:05Z by Steven

Our Zip Code May Be More Important Than Our Genetic Code: Social Determinants of Health, Law and Policy

Social Determinants of Health
Rhode Island Medical Journal
Volume 96, Number 7 (July 2013)

Dannie Ritchie, MD, MPH, Clinical Assistant Professor of Family Medicine
Lead, Transcultural Community Health Initiative
Brown University Center for Primary Care and Prevention

Public health is defined as “what we, as a society, do collectively to assure the condition for people to be healthy.” (Institute of Medicine (IOM), 1988, 2003). This evokes the social determinants of health – where we live, learn, work and play has a greater impact on individual and population health than does access to health care. However, when we discuss health and health disparities, clinical care problems are often framed as the problems with the health-care system. Recently, the Institute of Medicine has moved to make the distinction that in public health, the clinical care system is but one part of the overall health system, which should help to avoid the conflation of health as only a product of medical care (IOM 2010)…

This special issue contains a series of papers expanding key themes addressed in the seminars. Making real improvements in the health of our communities, especially the economically, socially and environmentally impoverished communities, requires much more than “fixing” our wasteful, fragmented and misdirected medical-care systems. If we are to achieve health equity, it is time for us to evaluate how to truly shift the dialogue, and not inadvertently replicate the same disparities we are trying to eliminate. We must examine how disparities impact us all across demographics and not only the most vulnerable, though they bear the greater burden. It is our intent with this edition to provide tools to better equip us to evaluate the social determinants of health and ways to take action through law and policy…

Read the entire article here.

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